Thursday, October 25, 2012

What does it take to be a successful squirrel?

On Tuesday we sampled various fruits to compare their taste between ripe and unripe fruits.  We also looked at how the structure of the fruit helps its seeds to disperse.

For homework you observed a squirrel for twenty minutes and recorded your observations.  Today in class we compared your observations and searched for patterns.  We generated a list of questions about squirrel behavior and from there developed a testable question.  While "Is there a difference between the mass of black squirrels and grey squirrels?" is a testable question, it is not one that WE could test.

The question that we asked was: Is there a difference between how close you can get to a black or grey squirrel before it runs.

We then developed a protocol to test this question and collected data.

Homework due Tuesday:

Export the the data from the google doc to an Excel spreadsheet, then:

1. Suggest ways that you could graph or present this data.

2. Identify two patterns that you see in the data

3. Identify two sources of natural variability in the data.  For each source of natural variability, explain how this could impact your data.

4. Identify two sources of experimental variability in the data.  For each source of experimental variability, explain how this could impact your data.

5. List three ways that this experiment could be improved in the future.  


Thursday, October 18, 2012

Fruits and Seeds Follow Up

Please complete the post lab questions.  These are due tomorrow.  You do not need to answer the first question on page 10.

Tuesday, October 16, 2012

Fruits, Flowers and Seeds Prelab

In lab on Thursday we will be looking at different types of seeds.  In our last lab we compared the mass of acorns, today you had a mental inventory where you examined variation in beak size of birds, on Thursday we'll look at variation in fruits, flowers and seeds.

Your prelab is embedded below.  Read and answer the questions on Pages 3-6.  Answer the questions on a separate sheet of paper, I will give you printed copies of the lab packet on Thursday


Saturday, October 13, 2012

Homework for Tuesday

Please complete the post lab question (in the post below).  There is no 3-2-1-R due this week.  On Tuesday, you will have an assessment on evolution. This is for me to see what you know and what we need to review.  If you have time this weekend, read over your evolution packet and your evolution concept map.

Creating Bar Graphs that Show Standard Error of the Mean

Below are two video tutorials that show you how to calculate standard error of the mean (first tutorial) and how to create a bar graph with customized error bars.  Watch each tutorial to learn how to make your graphs for the acorn lab.

How to calculate standard error of the mean and set up a table to create a bar graph

How to create a bar graph that compares two means and shows customized standard error bars

Copy and paste your graph into a word document, write your name, the date, a place for a page number and the heading "Acorn Post Lab Questions" then answer the questions below:

1. Compare the size of the standard error between your sample and the overall class sample.  Which standard error is smaller?  Why?

2. Identify one source of natural variability in your data.

3. Suggest a reason for how this variability could impact your data.

4. Identify two sources of experimental variability in your data.

5. For each source of experimental variability you identified, explain how it could impact your data.

6. What do the standard error of the mean bars (I) on your graph represent?


Save this document as "acorn post lab questions."

Print it out and bring it to class on Tuesday.


Friday, October 12, 2012

The difference between standard deviation and standard error

Today we learned about ways to manipulate our data and see how 'trustworthy' our mean is.  Tomorrow, please bring your computer to class again, as well as headphones. You will be learning how to make the beautiful graph below.

Wondering why your chart doesn't have a title?  I'm not going to do ALL the work for you :) 
Homework:  Please review your evolution concept map and the evolution packet.  You will have an assessment on evolution on Tuesday in class.

Thursday, October 11, 2012

Acorn Lab Data

We started class with the question "Why do oak trees make seeds (acorns)?"  Using your concept map of evolution, you needed to answer this question.

Then will collected 30 acorns, 15 Red Oak and 15 White Oak.  When we returned  to lab, you will found the mass of each of your acorns and then recorded this data in the Google doc that has been shared with you.

Please bring a computer to class tomorrow so we can learn how to manipulate our data.


Tuesday, October 9, 2012

Instagrok! (and evolution)

Today we continued learning about evolution, focusing on understanding each of the four mechanisms: mutation, migration and natural selection.

Click to link to the article on the four mechanisms of evolution.


Homework:  create a concept map for what you know about evolution.  Think about how evolution ties  into theme of "what lives where and why?"

Need help?  You can use instagrok!

Thursday, October 4, 2012

Quick Evolution Leads to Quiet Crickets




December 2006, updates added June 2008 and June 2011


Attack of the flesh-eating parasitoid maggots!! Mutant mute crickets run rampant in tropical paradise!! The headlines may sound like a trailer for a cheap horror flick — but in fact, these sensationalist sound bites accurately describe the situation on the Hawaiian island of Kauai. The "flesh-eating parasitoid maggots" are the offspring of the fly, Ormia ochracea, which invaded Hawaii from North America, and the mutant crickets are the flies' would-be victims. The flies follow the chirps of a calling cricket and then deposit a smattering of wriggling maggots onto the cricket's back. The maggots burrow into the cricket, and emerge, much fatter, a week later — killing the cricket in the process. But this fall, biologists Marlene Zuk, John Rotenberry, and Robin Tinghitella announced a breakdown in business-as-usual in this gruesome interaction: in just a few years, the crickets of Kauai have evolved a strategy to avoid becoming a maggot's lunch — but the strategy comes at a cost...
cricketparasitic maggots inside a cricket
On the left is a typical field cricket like those on Kauai, and on the right are the parasitic maggots of Ormia ochracea inside such a cricket.
Where's the evolution?
The evolution in this story hinges on what is probably a single mutation affecting wing shape in male crickets. Normal males have specially-equipped wings with a scraper and teeth that produce a chirp when rubbed together. Mutant males, on the other hand, have wings more like those of a female, without the noise-making features, turning them into something of an auditory cross-dresser: mutant males are silent like females and cannot chirp to attract a mate.
normal male, mutant male, and female cricket wings
Undersides of the right forewings from normal male, mutant male, and female crickets. The corresponding SEM micrographs show the part of the wings where noise is generated. Normal male wings have a toothy vein that is scraped to make sound. In mutant males, that vein is smaller and repositioned. Females don't have this toothed vein at all.

Which is more advantageous for a male cricket: normal noisy wings or mutant mute wings? Well, it depends. As shown in the diagram below, on islands without the parasitic fly, noisy-winged crickets have the advantage since they can attract mates with their calls — unlike the mutant crickets. On those fly-free islands, we'd expect natural selection to favor the normal crickets and weed out the mutant silent crickets — who would be less attractive to females, would get fewer chances to mate, and hence would leave behind fewer offspring. However, on fly-infested islands, mutants have the advantage; calling males get attacked by flies and eaten by maggots, while the silent males evade the flies and survive to mate another day. In that situation, natural selection favors the mutant crickets — though some calling males are likely to remain in the population because of their strong advantage when it comes to attracting a mate, as is the case on Kauai.

Mutation on the X chromosomeBased on mating experiments, the cricket wing mutation appears to be sex-linked. In humans, sex is determined by the X and Y chromosomes: XX individuals are female and XY individuals are male. However, crickets have no Y chromosomes: XX crickets are female and crickets with a single X (X- individuals) are male. The mutant wing gene is located on the cricket's X chromosome, represented by the symbol Xm. All females (XX, XXm, and XmXm) have the normal mute female wings, X- males have the normal noisy male wings, but Xm- males have the mutant mute wings.


what happens to normal and mutant crickets when flies are present and when flies are absent

The island of Kauai is testimony to how quickly natural selection can operate under the right conditions. Between 1991 (when they started monitoring the situation on Kauai) and 2001, Marlene Zuk and her colleagues documented major declines in the island's cricket population. The crickets seemed to be no match for the parasitic flies. In one study, 30% of calling males were infested with the parasite, and in 2001, the island was virtually silent: the team heard only one cricket call! Such intense parasitism represents strong selective pressure favoring any genetic change that helps the crickets evade the flies. And in 2003, the team discovered the result of that selection: the cricket population had bounced back! The island was again crawling with crickets — but of the silent sort. When the team investigated further, they discovered the wing mutation. Between the late 1990s and 2003, in just 20 or so cricket generations, Kauai's cricket population had evolved into an almost entirely silent one!So is that it? Problem solved by evolutionary ingenuity? Well, not quite... Natural selection is not a magic bullet; it simply selects the variants that work at a given time, in a particular environment, from what's available in the population. Silent wings may be the key to avoiding parasitic flies — but they are also a serious liability when it comes to the local singles scene, since females locate mates by following their chirps. Currently, mutant mute males are dealing with their dating woes by hanging out near their literal "wingmen" — the few calling males remaining in the population. Female crickets are attracted to these callers but may get distracted by a mutant mute male en route.
A silent male that intercepts a female has made it over one hurdle, but even then, his mute wings are a major handicap in terms of reproductive success. Typically, a male cricket that has attracted a female would then perform a courtship song to seal the deal, but mutant males have no voice for that sweet-talking. For most female crickets, the lack of a courtship song would be a serious turn-off. However, Kauai's females seem to be a bit less choosy and are willing to accept a silent male as a mate. Marlene Zuk and colleagues hypothesize that the Kauai population has evolved to be less choosy than other populations because of the high frequency of mute males on that island.
So far, the mute males' bait-and-switch strategy for finding a mate seems to be working — after all, the frequency of the mutation has skyrocketed, and all those males carrying the mutation must have been fathered by mute males who had some mating success. Will this strategy succeed in the long run? It's hard to say. The mute wings mutation is a trade-off — a brokered deal between selection for survival (avoiding parasitism) and sexual selection (attracting a mate). At the moment, because of the intensity of parasitism, selection for survival seems to have gained the upper hand, increasing the frequency of the mute wings mutation. But as calling males become rarer, calling might become more valuable in terms of reproductive success, shifting the balance of power towards sexual selection and increasing the frequency of normal wings in the population. Or because of the difficulty of locating their now nearly silent hosts, the fly population could crash, again changing the way that natural selection acts on the crickets. But whatever the ultimate fate of the Kauaian cricket population, their potential for rapid evolution is well-documented. These crickets have undergone major evolution in the past few years, and we should expect further evolutionary changes in their future.

News update, June 2008Since their report on the rapid evolution of silent male crickets on Kauai, researcher Marlene Zuk and colleagues have continued to investigate this intriguing example of evolution in action. What they've learned has shed new light on how such a major shift in the cricket population occurred so quickly:

  • Female crickets generally won't mate with a male unless he sings a courtship song — so how are these mute males managing to reproduce and pass their silent wing mutation on to their offspring? The researchers wondered the same thing. Luckily, they had a group of laboratory crickets descended from the Kauaian population before the silent wing mutation arose, as well as a group from the post-mutation population. The scientists compared how females from the two groups responded to males and found that females from both groups were equally willing to mate with silent males. Kauaian female crickets seem to have a history of lax standards when it comes to choosing a mate. This suggests that it would have been easy for the silent mutation to gain a foothold in the Kauaian population since the females there had some proclivity for strong, silent types even before the handy mutation showed up in the population.
  • How is the silent wing trait passed on to offspring? Further experiments have confirmed the researchers' suspicions that the silent wing trait is caused by a mutation to a single gene located on the crickets' X chromosome. This finding helps explain how the mutation rose to such high frequency in less than 20 generations — the blink of an eye in evolutionary terms. Single mutations (as opposed to a series of mutations in different genes working together) cannot be broken up by recombination and are expected to spread quickly if advantageous.
Marlene Zuk's research group continues to investigate unanswered questions regarding this rapid evolutionary change. Are Kauaian females unusual in their lax standards? Is there any explanation for their benevolence towards mute males? What will the ultimate fate of the dwindling calling males be? Can the population survive if completely silenced? How will all of this affect the parasitic flies? As answers to these and other questions are discovered, we'll keep you updated! The story is far from over …

This news update below was not in your packet.  If you have time, read it!

News update, June 2011
Research on Hawaii's quiet crickets continues! Most recently, Robin Tinghitella and her colleagues investigated the origins of the Hawaiian crickets to learn more about the situation in which the silent-winged crickets evolved. They collected DNA samples from crickets on the Hawaiian Islands, other Pacific islands, and Australia, and used the sequences to learn about the cricket's evolutionary history. First, they discovered that the populations in Hawaii had extremely low genetic variation compared to the Australian populations and that the Pacific Island populations had intermediate levels of genetic variation. This is consistent with the idea that the crickets island hopped from Australia, to the Pacific Islands, to Hawaii — and that each time a group of crickets hopped to a new island, they carried only a small portion of the genetic variation present in the source population. Similarities among the sequences themselves also support this idea.
But how exactly did crickets "hop" over thousands of miles of open ocean? Tinghitella and her colleagues noticed that the crickets' island-hopping pattern matched the likely movement of Polynesian settlers. The crickets may have come to Hawaii with the first human settlers, carried either on purpose, since crickets feature prominently in Polynesian folklore and traditions, or as stowaways.
However crickets got to Hawaii, it's clear that there weren't very many of them when they arrived. The low level of genetic variation in Hawaiian populations today strongly suggests that these crickets have experienced a population bottleneck — a reduction in population size, which probably occurred when small groups of crickets invaded a new island. This small starting population size could have contributed to the spread of the silent wing mutation today. When population size is small, selection may favor females that aren't very choosy about their mates. After all, when there are only a few males to choose from, a picky female may not mate at all! If this is the case — if female crickets on Hawaii evolved to be less choosy early on, and as described in the news update above, it seems they did — it would have made it easier for the silent wing mutation to spread through the population. Unfussy females would accept silent partners and pass the silent gene on to their offspring.
Meanwhile, as researchers continue to study their evolution, the crickets themselves continue to evolve right under our noses! The mutation for silent wings seems to have been carried from Kauai to the population of crickets living on Oahu. Will it spread through that population as well? Stay tuned to find out ...
For more about this research, check out Robin Tinghitella's blog post on the topic.


Transitioning from Climate Change to Evolution

Today we didn't have lab, so we used our long block to dive into evolution.  In order to transition from climate change to evolution, we used data from Stirling and Parkinson (2006), showing decreasing lone female polar bear body mass over time.

http://tinyurl.com/9llchun
Examining this graph also gave us the opportunity to revisit independent and dependent variables as well as start to talk about expressing variation in data.  We tried to come up with the causes for the decrease in weight over the years (as we learned later in class, the environment can play a big role in determining if a trait is beneficial for an individual).

Before we could dive into learning about evolution, we needed to clarify the terms evolution and theory.  These words have a very different meaning in science, than they do in other disciplines. 

We watched the videos below.



To see variation in a population for ourselves, we visited the finches and made observations about the variation that we saw.

Homework:  Read the article "Attack of the Mutant Crickets!" and answer the questions on page 6.